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- Agricultural Health and Safety Center
- Agricultural Issues Center
- Air Quality Research
- Alzheimer's Disease Center
- Aquatic Ecosystems Analysis Laboratory
- Biotechnology Program
- Bodega Marine Laboratory
- California Cultures Initiative (formerly the Pacific Regional Humanities Institute)
- California Institute of Food and Agricultural Research (CIFAR)
- California Lighting Technology Center (CLTC)
- California National Primate Research Center (CRPRC)
- Cancer Center
- CalSpace: Center of Excellence Agriculture, Natural Resources, Environment
- Center for Animals in Society
- Center for Aquatic Biology and Aquaculture
- Center for Biophotonics Science and Technology
- Center for Computational Science and Engineering
- Center for Companion Animal Health
- Center for Comparative Medicine
- Center for Ecological Health Research
- Center for Environmental Health Sciences
- Center for Health and the Environment (formerly the Institute of Toxicology and Environmental Health)
- Center for Health Services Research in Primary Care
- Center for Healthy Aging
- Center for History, Society, and Culture
- Center for Mind and Brain
- Center for Neuroscience
- Center for Population Biology
- Center for Spatial Technologies and Remote Sensing (CSTARS)
- Certificate Program in Business Development
- Clinical and Translational Science Center
- Computational Science and Engineering Center
- Cooperative Research Extension Services for Schools (CRESS)
- The Davis Humanities Institute
- DELTA Group (Determination of Effects and Long-Range Transport of Aerosols)
- Dairy Research and Information Center (DRINC)
- Economy, Justice and Society
- The UC Davis Functional Glycobiology Program
- Genome Center
- Global and Gender Issues
- The Hemispheric Institute on the Americas (HIA)
- Indigenous Research Center of the Americas
- Information Center for the Environment (ICE)
- Institute for Data Analysis and Visualization (IDAV, formerly known as the Center for Image Processing and Integrated Computing, CIPIC)
- The Institute on Global Conflict and Cooperation
- The Institute of Governmental Affairs
- The Institute of Transportation Studies
- International Agricultural Development
- John Muir Institute of the Environment
- M.I.N.D. Institute (Medical Investigation of Neurodevelopmental Disorders)
- Nanomaterials in the Environment, Agriculture and Technology (NEAT)
- Program in International Nutrition
- Quantitative Research Services
- Road Ecology Center
- Robert Mondavi Institute for Wine and Food Science (RMI)
- Small Farm Center
- Statewide Integrated Pest Management Program
- Sustainable Agriculture Farming Systems Project (SAFS)
- Sustainable Agricultural Research and Education Program (SAREP)
- Tahoe Environmental Research Center
- UC Groundwater Cooperative Extension Program
- UC Statewide Integrated Pest Management Program
- UC Toxic Substances Research and Teaching Program
- Violence Prevention Research Program
- Western Center for Agricultural Health and Safety
- Wine Executive Program
- Wildlife Health Center